Human SNP ID | rs12280753 |
---|---|
Human chromosome | chr11 |
Human SNP position | 116742944 |
Pig chromosome | chr9 |
Pig SNP position | 49203612 |
PubMed ID | 20838585 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20838585 |
Study | Longitudinal genome-wide association of cardiovascular disease risk factors in the Bogalusa heart study. |
Disease/Trait | Cardiovascular disease risk factors |
Initial sample | 525 European ancestry individuals |
Replication sample | 2,265 European ancestry individuals |
Region | 11q23.3 |
Chromosome id | chr11 |
Chromosome position | 116742944 |
Reported gene | CADM1, APOA5, BUD13 |
Mapped gene | LOC101929011 - BUD13 |
Upstream gene id | 101929011 |
Downstream gene id | 84811 |
SNP gene ids | |
Upstream gene distance | 84692 |
Downstream gene distance | 5226 |
SNP risk allele | rs12280753-T |
SNPs | rs12280753 |
Merged | 0 |
SNP id current | 12280753 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.07 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (triglycerides) |
Or beta | 0.69 |
%95 Ci | [0.40-0.98] % SD increase, SNPxAGE interaction |
Platform | Illumina [545821] |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST000789 |