SNP Detail For rs12274302
1.Mapping Information
Human SNP ID rs12274302
Human chromosome chr11
Human SNP position 90853732
Pig chromosome chr9
Pig SNP position 26655244
2.Annotation Information
PubMed ID20041166
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20041166
StudyCommon genetic variation and the control of HIV-1 in humans.
Disease/TraitHIV-1 control
Initial sample2,362 European ancestry cases
Replication sampleNA
Region11q14.3
Chromosome idchr11
Chromosome position90853732
Reported geneintergenic
Mapped geneDISC1FP1
Upstream gene id
Downstream gene id
SNP gene ids101929222
Upstream gene distance
Downstream gene distance
SNP risk allelers12274302-?
SNPsrs12274302
Merged0
SNP id current12274302
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequencyNR
P value0.0000004
Pvalue mlog6.39794000867203
P value text(progression)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitHIV-1 infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000180
Study accessionGCST000549