Human SNP ID | rs12273350 |
---|---|
Human chromosome | chr11 |
Human SNP position | 125371150 |
Pig chromosome | chr9 |
Pig SNP position | 58134434 |
PubMed ID | 22137330 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/22137330 |
Study | Genome-wide study links MTMR7 gene to variant Creutzfeldt-Jakob risk. |
Disease/Trait | Creutzfeldt-Jakob disease (variant) |
Initial sample | 93 European ancestry cases, 1,504 European ancestry controls |
Replication sample | 42 European ancestry cases |
Region | 11q24.2 |
Chromosome id | chr11 |
Chromosome position | 125371150 |
Reported gene | NR |
Mapped gene | PKNOX2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 63876 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12273350-? |
SNPs | rs12273350 |
Merged | 0 |
SNP id current | 12273350 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [287554] |
CNV | N |
Mapped trait | Creutzfeldt Jacob Disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004226 |
Study accession | GCST001334 |