SNP Detail For rs12273350
1.Mapping Information
Human SNP ID rs12273350
Human chromosome chr11
Human SNP position 125371150
Pig chromosome chr9
Pig SNP position 58134434
2.Annotation Information
PubMed ID22137330
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/22137330
StudyGenome-wide study links MTMR7 gene to variant Creutzfeldt-Jakob risk.
Disease/TraitCreutzfeldt-Jakob disease (variant)
Initial sample93 European ancestry cases, 1,504 European ancestry controls
Replication sample42 European ancestry cases
Region11q24.2
Chromosome idchr11
Chromosome position125371150
Reported geneNR
Mapped genePKNOX2
Upstream gene id
Downstream gene id
SNP gene ids63876
Upstream gene distance
Downstream gene distance
SNP risk allelers12273350-?
SNPsrs12273350
Merged0
SNP id current12273350
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformAffymetrix [287554]
CNVN
Mapped traitCreutzfeldt Jacob Disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004226
Study accessionGCST001334