SNP Detail For rs12257178
1.Mapping Information
Human SNP ID rs12257178
Human chromosome chr10
Human SNP position 111256470
Pig chromosome chr14
Pig SNP position 132559308
2.Annotation Information
PubMed ID26081443
JournalTwin Res Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26081443
StudyGenome-Wide Meta-Analysis of Longitudinal Alcohol Consumption Across Youth and Early Adulthood.
Disease/TraitLongitudinal alcohol consumption
Initial sample2,126 adolescents and early adults
Replication sampleNA
Region10q25.2
Chromosome idchr10
Chromosome position111256470
Reported geneADRA2A
Mapped geneADRA2A - LOC105378484
Upstream gene id150
Downstream gene id105378484
SNP gene ids
Upstream gene distance175563
Downstream gene distance143811
SNP risk allelers12257178-A
SNPsrs12257178
Merged
SNP id current12257178
Contextintergenic_variant
Intergenic1
Allele frequency0.39
P value0.0000005
Pvalue mlog6.30102999566398
P value text(trajectory)
Or beta5.04
%95 Ciz-score decrease
PlatformIllumina [866099] (imputed)
CNVN
Mapped traitlongitudinal alcohol consumption measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007645
Study accessionGCST002981