SNP Detail For rs12249434
1.Mapping Information
Human SNP ID rs12249434
Human chromosome chr10
Human SNP position 116539194
Pig chromosome chr14
Pig SNP position 138010957
2.Annotation Information
PubMed ID24489884
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24489884
StudyGenome-wide association study of proneness to anger.
Disease/TraitAnger
Initial sample8,747 European ancestry individuals
Replication sampleNA
Region10q25.3
Chromosome idchr10
Chromosome position116539194
Reported genePNLIP, PNLIPRP1
Mapped genePNLIPRP3 - PNLIP
Upstream gene id119548
Downstream gene id5406
SNP gene ids
Upstream gene distance61233
Downstream gene distance6722
SNP risk allelers12249434-A
SNPsrs12249434
Merged0
SNP id current12249434
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.088
P value0.000004
Pvalue mlog5.39794000867203
P value text(Temperament)
Or beta0.22
%95 Ci[NR] unit increase
PlatformAffymetrix [677643]
CNVN
Mapped traitaggressive behavior
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003015
Study accessionGCST002324