Human SNP ID | rs12249377 |
---|---|
Human chromosome | chr10 |
Human SNP position | 90833199 |
Pig chromosome | chr14 |
Pig SNP position | 111642135 |
PubMed ID | 24736177 |
---|---|
Journal | Neuroimage |
Link | www.ncbi.nlm.nih.gov/pubmed/24736177 |
Study | Common genetic variants and gene expression associated with white matter microstructure in the human brain. |
Disease/Trait | White matter microstructure (global fractional anisotropy) |
Initial sample | 727 Mexican American individuals from 65 families, 49 Mexican American individuals |
Replication sample | NA |
Region | 10q23.31 |
Chromosome id | chr10 |
Chromosome position | 90833199 |
Reported gene | HTR7 |
Mapped gene | HTR7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3363 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12249377-? |
SNPs | rs12249377 |
Merged | 0 |
SNP id current | 12249377 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000000003 |
Pvalue mlog | 9.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [929187] |
CNV | N |
Mapped trait | white matter microstructure measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005674 |
Study accession | GCST002409 |