Human SNP ID | rs12245299 |
---|---|
Human chromosome | chr10 |
Human SNP position | 54153940 |
Pig chromosome | chr14 |
Pig SNP position | 104592607 |
PubMed ID | 25514360 |
---|---|
Journal | Am J Respir Cell Mol Biol |
Link | www.ncbi.nlm.nih.gov/pubmed/25514360 |
Study | Genome Wide Association Study Identifies Novel Loci Associated with Airway Responsiveness in COPD. |
Disease/Trait | Airway responsiveness in chronic obstructive pulmonary disease |
Initial sample | Up to 4,108 European American cases |
Replication sample | NA |
Region | 10q21.1 |
Chromosome id | chr10 |
Chromosome position | 54153940 |
Reported gene | PCDH15 |
Mapped gene | PCDH15 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 65217 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12245299-T |
SNPs | rs12245299 |
Merged | 0 |
SNP id current | 12245299 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0002 |
P value | 0.00000006 |
Pvalue mlog | 7.22184874961635 |
P value text | (O鈥機onnor Slope) |
Or beta | 1.392 |
%95 Ci | [NR] unit increase |
Platform | Illumina [546355] |
CNV | N |
Mapped trait | airway responsiveness measurement, chronic obstructive pulmonary disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006897, http://www.ebi.ac.uk/efo/EFO_0000341 |
Study accession | GCST002724 |