SNP Detail For rs12245299
1.Mapping Information
Human SNP ID rs12245299
Human chromosome chr10
Human SNP position 54153940
Pig chromosome chr14
Pig SNP position 104592607
2.Annotation Information
PubMed ID25514360
JournalAm J Respir Cell Mol Biol
Linkwww.ncbi.nlm.nih.gov/pubmed/25514360
StudyGenome Wide Association Study Identifies Novel Loci Associated with Airway Responsiveness in COPD.
Disease/TraitAirway responsiveness in chronic obstructive pulmonary disease
Initial sampleUp to 4,108 European American cases
Replication sampleNA
Region10q21.1
Chromosome idchr10
Chromosome position54153940
Reported genePCDH15
Mapped genePCDH15
Upstream gene id
Downstream gene id
SNP gene ids65217
Upstream gene distance
Downstream gene distance
SNP risk allelers12245299-T
SNPsrs12245299
Merged0
SNP id current12245299
Contextintron_variant
Intergenic0
Allele frequency0.0002
P value0.00000006
Pvalue mlog7.22184874961635
P value text(O鈥機onnor Slope)
Or beta1.392
%95 Ci[NR] unit increase
PlatformIllumina [546355]
CNVN
Mapped traitairway responsiveness measurement, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006897, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST002724