Human SNP ID | rs12236871 |
---|---|
Human chromosome | chr9 |
Human SNP position | 3589117 |
Pig chromosome | JH118911-1 |
Pig SNP position | 21870 |
PubMed ID | 25967671 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/25967671 |
Study | Genome-wide association analysis identifies three new risk loci for gout arthritis in Han Chinese. |
Disease/Trait | Gout |
Initial sample | 1,255 Han Chinese ancestry male cases, 1,848 Han Chinese ancestry male controls |
Replication sample | 3,020 Han Chinese ancestry male cases, 4,424 Han Chinese ancestry male controls |
Region | 9p24.2 |
Chromosome id | chr9 |
Chromosome position | 3589117 |
Reported gene | RFX3 |
Mapped gene | RFX3 - LOC105375960 |
Upstream gene id | 5991 |
Downstream gene id | 105375960 |
SNP gene ids | |
Upstream gene distance | 63116 |
Downstream gene distance | 74310 |
SNP risk allele | rs12236871-? |
SNPs | rs12236871 |
Merged | 0 |
SNP id current | 12236871 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.589 |
P value | 0.0000000001 |
Pvalue mlog | 10 |
P value text | |
Or beta | 1.23 |
%95 Ci | [NR] |
Platform | Affymetrix [603505] |
CNV | N |
Mapped trait | gout |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004274 |
Study accession | GCST002909 |