SNP Detail For rs12210810
1.Mapping Information
Human SNP ID rs12210810
Human chromosome chr6
Human SNP position 118332041
Pig chromosome chr1
Pig SNP position 48918008
2.Annotation Information
PubMed ID19305409
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19305409
StudyCommon variants at ten loci modulate the QT interval duration in the QTSCD Study.
Disease/TraitQT interval
Initial sample15,842 European ancestry individuals
Replication sampleup to 13,602 individuals
Region6q22.31
Chromosome idchr6
Chromosome position118332041
Reported genePLN
Mapped geneLOC105377966 - LOC105377968
Upstream gene id105377966
Downstream gene id105377968
SNP gene ids
Upstream gene distance6676
Downstream gene distance3319
SNP risk allelers12210810-C
SNPsrs12210810
Merged0
SNP id current12210810
Contextintergenic_variant
Intergenic1
Allele frequency0.06
P value0.00000000000000002
Pvalue mlog16.698970004336
P value text
Or beta3.13
%95 Ci[2.29-3.97] ms decrease
PlatformAffymetrix, Illumina [2557000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST000364