Human SNP ID | rs12210810 |
---|---|
Human chromosome | chr6 |
Human SNP position | 118332041 |
Pig chromosome | chr1 |
Pig SNP position | 48918008 |
PubMed ID | 19305409 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19305409 |
Study | Common variants at ten loci modulate the QT interval duration in the QTSCD Study. |
Disease/Trait | QT interval |
Initial sample | 15,842 European ancestry individuals |
Replication sample | up to 13,602 individuals |
Region | 6q22.31 |
Chromosome id | chr6 |
Chromosome position | 118332041 |
Reported gene | PLN |
Mapped gene | LOC105377966 - LOC105377968 |
Upstream gene id | 105377966 |
Downstream gene id | 105377968 |
SNP gene ids | |
Upstream gene distance | 6676 |
Downstream gene distance | 3319 |
SNP risk allele | rs12210810-C |
SNPs | rs12210810 |
Merged | 0 |
SNP id current | 12210810 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.06 |
P value | 0.00000000000000002 |
Pvalue mlog | 16.698970004336 |
P value text | |
Or beta | 3.13 |
%95 Ci | [2.29-3.97] ms decrease |
Platform | Affymetrix, Illumina [2557000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST000364 |