SNP Detail For rs12209223
1.Mapping Information
Human SNP ID rs12209223
Human chromosome chr6
Human SNP position 75454873
Pig chromosome chr1
Pig SNP position 101505492
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region6q14.1
Chromosome idchr6
Chromosome position75454873
Reported geneFILIP1
Mapped geneLOC101928540, FILIP1
Upstream gene id
Downstream gene id
SNP gene ids101928540, 27145
Upstream gene distance
Downstream gene distance
SNP risk allelers12209223-A
SNPsrs12209223
Merged0
SNP id current12209223
Contextintron_variant
Intergenic0
Allele frequency0.116
P value5E-25
Pvalue mlog24.3010299956639
P value text
Or beta0.051
%95 Ci[0.041-0.061] unit increase
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647