SNP Detail For rs12198650
1.Mapping Information
Human SNP ID rs12198650
Human chromosome chr6
Human SNP position 153398850
Pig chromosome chr1
Pig SNP position 15361152
2.Annotation Information
PubMed ID26242244
JournalSci Rep
Linkwww.ncbi.nlm.nih.gov/pubmed/26242244
StudyAssociation of chromosome 5q21.3 polymorphisms with the exploratory eye movement dysfunction in schizophrenia.
Disease/TraitExploratory eye movement dysfunction in schizophrenia (number of eye fixations)
Initial sample128 Han Chinese ancestry cases
Replication sampleNA
Region6q25.2
Chromosome idchr6
Chromosome position153398850
Reported geneNR
Mapped geneLOC105378066
Upstream gene id
Downstream gene id
SNP gene ids105378066
Upstream gene distance
Downstream gene distance
SNP risk allelers12198650-?
SNPsrs12198650
Merged
SNP id current12198650
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta16.64
%95 Ci[9.68-23.6] unit decrease
PlatformIllumina [498648]
CNVN
Mapped traitexploratory eye movement measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007700
Study accessionGCST003068