SNP Detail For rs12190758
1.Mapping Information
Human SNP ID rs12190758
Human chromosome chr6
Human SNP position 92438623
Pig chromosome chr1
Pig SNP position 67362630
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region6q15
Chromosome idchr6
Chromosome position92438623
Reported geneNR
Mapped geneLOC105377895 - LOC105377896
Upstream gene id105377895
Downstream gene id105377896
SNP gene ids
Upstream gene distance192358
Downstream gene distance146281
SNP risk allelers12190758-G
SNPsrs12190758
Merged
SNP id current12190758
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta1.0638298
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048