SNP Detail For rs12189362
1.Mapping Information
Human SNP ID rs12189362
Human chromosome chr5
Human SNP position 153677988
Pig chromosome chr16
Pig SNP position 75195096
2.Annotation Information
PubMed ID21658281
JournalBMC Cardiovasc Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/21658281
StudyGWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease.
Disease/TraitSudden cardiac arrest
Initial sample88 European ancestry cases, 517 European ancestry controls
Replication sampleNA
Region5q33.2
Chromosome idchr5
Chromosome position153677988
Reported geneGRIA1
Mapped geneGRIA1
Upstream gene id
Downstream gene id
SNP gene ids2890
Upstream gene distance
Downstream gene distance
SNP risk allelers12189362-?
SNPsrs12189362
Merged0
SNP id current12189362
Contextintron_variant
Intergenic0
Allele frequency0.12
P value0.0000000003
Pvalue mlog9.52287874528033
P value text(Recessive)
Or beta1.5
%95 Ci[1.32-1.69]
PlatformAffymetrix [319222]
CNVN
Mapped traitsudden cardiac arrest
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004278
Study accessionGCST001099