Human SNP ID | rs12189362 |
---|---|
Human chromosome | chr5 |
Human SNP position | 153677988 |
Pig chromosome | chr16 |
Pig SNP position | 75195096 |
PubMed ID | 21658281 |
---|---|
Journal | BMC Cardiovasc Disord |
Link | www.ncbi.nlm.nih.gov/pubmed/21658281 |
Study | GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease. |
Disease/Trait | Sudden cardiac arrest |
Initial sample | 88 European ancestry cases, 517 European ancestry controls |
Replication sample | NA |
Region | 5q33.2 |
Chromosome id | chr5 |
Chromosome position | 153677988 |
Reported gene | GRIA1 |
Mapped gene | GRIA1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2890 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12189362-? |
SNPs | rs12189362 |
Merged | 0 |
SNP id current | 12189362 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.12 |
P value | 0.0000000003 |
Pvalue mlog | 9.52287874528033 |
P value text | (Recessive) |
Or beta | 1.5 |
%95 Ci | [1.32-1.69] |
Platform | Affymetrix [319222] |
CNV | N |
Mapped trait | sudden cardiac arrest |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004278 |
Study accession | GCST001099 |