SNP Detail For rs12150284
1.Mapping Information
Human SNP ID rs12150284
Human chromosome chr17
Human SNP position 10127773
Pig chromosome chr12
Pig SNP position 57546850
2.Annotation Information
PubMed ID24002674
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24002674
StudyGenome-wide association study and meta-analysis of intraocular pressure.
Disease/TraitIntraocular pressure
Initial sample2,847 European ancestry primary open angle glaucoma cases, 3,389 European ancestry controls
Replication sampleNA
Region17p13.1
Chromosome idchr17
Chromosome position10127773
Reported geneGAS7
Mapped geneGAS7
Upstream gene id
Downstream gene id
SNP gene ids8522
Upstream gene distance
Downstream gene distance
SNP risk allelers12150284-A
SNPsrs12150284
Merged0
SNP id current12150284
Contextintron_variant
Intergenic0
Allele frequency0.35
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.62
%95 Ci[0.33-0.91] mmHg decrease
PlatformIllumina [466573]
CNVN
Mapped traitintraocular pressure measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004695
Study accessionGCST002168