SNP Detail For rs12148477
1.Mapping Information
Human SNP ID rs12148477
Human chromosome chr15
Human SNP position 51360922
Pig chromosome chr1
Pig SNP position 133539005
2.Annotation Information
PubMed ID24049095
JournalJ Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24049095
StudyGenome-wide association study of sex hormones, gonadotropins and sex hormone-binding protein in Chinese men.
Disease/TraitFollicule stimulating hormone
Initial sample1,999 Han Chinese ancestry individuals
Replication sample1,496 East Asian ancestry individuals
Region15q21.2
Chromosome idchr15
Chromosome position51360922
Reported geneNR
Mapped geneGLDN
Upstream gene id
Downstream gene id
SNP gene ids342035
Upstream gene distance
Downstream gene distance
SNP risk allele
SNPsrs12148477
Merged0
SNP id current12148477
Contextintron_variant
Intergenic0
Allele frequency0.21
P value0.0000007
Pvalue mlog6.15490195998574
P value text(FSH)
Or beta
%95 Ci
PlatformIllumina [709211]
CNVN
Mapped traitfollicle stimulating hormone measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004768
Study accessionGCST002199