Human SNP ID | rs12148088 |
---|---|
Human chromosome | chr15 |
Human SNP position | 45916829 |
Pig chromosome | chr1 |
Pig SNP position | 140304050 |
PubMed ID | 25625606 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25625606 |
Study | Investigating the Genetics of Hippocampal Volume in Older Adults without Dementia. |
Disease/Trait | Hippocampal volume |
Initial sample | 498 European ancestry older adult individuals |
Replication sample | NA |
Region | 15q21.1 |
Chromosome id | chr15 |
Chromosome position | 45916829 |
Reported gene | intergenic |
Mapped gene | SQRDL - LOC105370802 |
Upstream gene id | 58472 |
Downstream gene id | 105370802 |
SNP gene ids | |
Upstream gene distance | 225535 |
Downstream gene distance | 10000 |
SNP risk allele | rs12148088-T |
SNPs | rs12148088 |
Merged | 0 |
SNP id current | 12148088 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 92.15 |
%95 Ci | [51.68-132.62] unit decrease |
Platform | Affymetrix, Illumina [at least 646791] (imputed) |
CNV | N |
Mapped trait | hippocampal volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005035 |
Study accession | GCST002761 |