SNP Detail For rs12148088
1.Mapping Information
Human SNP ID rs12148088
Human chromosome chr15
Human SNP position 45916829
Pig chromosome chr1
Pig SNP position 140304050
2.Annotation Information
PubMed ID25625606
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25625606
StudyInvestigating the Genetics of Hippocampal Volume in Older Adults without Dementia.
Disease/TraitHippocampal volume
Initial sample498 European ancestry older adult individuals
Replication sampleNA
Region15q21.1
Chromosome idchr15
Chromosome position45916829
Reported geneintergenic
Mapped geneSQRDL - LOC105370802
Upstream gene id58472
Downstream gene id105370802
SNP gene ids
Upstream gene distance225535
Downstream gene distance10000
SNP risk allelers12148088-T
SNPsrs12148088
Merged0
SNP id current12148088
Contextintron_variant
Intergenic1
Allele frequency
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta92.15
%95 Ci[51.68-132.62] unit decrease
PlatformAffymetrix, Illumina [at least 646791] (imputed)
CNVN
Mapped traithippocampal volume
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005035
Study accessionGCST002761