SNP Detail For rs12147450
1.Mapping Information
Human SNP ID rs12147450
Human chromosome chr14
Human SNP position 20489274
Pig chromosome chr7
Pig SNP position 83437941
2.Annotation Information
PubMed ID19875103
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/19875103
StudyGenomewide association study of movement-related adverse antipsychotic effects.
Disease/TraitResponse to antipsychotic therapy (extrapyramidal side effects)
Initial sample421 European ancestry schizophrenia cases, 214 African American schizophrenia cases, 103 schizophrenia cases
Replication sampleNA
Region14q11.2
Chromosome idchr14
Chromosome position20489274
Reported geneintergenic
Mapped genePNP - RNASE10
Upstream gene id4860
Downstream gene id338879
SNP gene ids
Upstream gene distance11268
Downstream gene distance21198
SNP risk allelers12147450-?
SNPsrs12147450
Merged0
SNP id current12147450
Contextregulatory_region_variant
Intergenic1
Allele frequencyNR
P value0.0000006
Pvalue mlog6.22184874961635
P value text(BARS)
Or beta
%95 Ci
PlatformAffymetrix [492000]
CNVN
Mapped traitresponse to antipsychotic drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097332
Study accessionGCST000514