SNP Detail For rs12144699
1.Mapping Information
Human SNP ID rs12144699
Human chromosome chr1
Human SNP position 59139525
Pig chromosome chr6
Pig SNP position 140805663
2.Annotation Information
PubMed ID26503763
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/26503763
StudyGenome-wide association study identifies SESTD1 as a novel risk gene for lithium-responsive bipolar disorder.
Disease/TraitSubjective response to lithium treatment
Initial sample1,639 European ancestry bipolar disorder responder cases, 8,899 European ancestry controls
Replication sampleNA
Region1p32.1
Chromosome idchr1
Chromosome position59139525
Reported geneOR4F16, OR4F29, LOC729467, LOC100133331, LOC100132287, FGGY
Mapped geneHSD52
Upstream gene id
Downstream gene id
SNP gene ids729467
Upstream gene distance
Downstream gene distance
SNP risk allelers12144699-A
SNPsrs12144699
Merged0
SNP id current12144699
Contextintron_variant
Intergenic0
Allele frequency0.04
P value0.0000006
Pvalue mlog6.22184874961635
P value text
Or beta1.67
%95 Ci[NR]
PlatformAffymetrix, Illumina [> 8000000] (imputed)
CNVN
Mapped traitbipolar disorder, response to lithium ion
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://purl.obolibrary.org/obo/GO_0010226
Study accessionGCST003158