Human SNP ID | rs12143327 |
---|---|
Human chromosome | chr1 |
Human SNP position | 112068273 |
Pig chromosome | chr4 |
Pig SNP position | 118390346 |
PubMed ID | 25918132 |
---|---|
Journal | Toxicol Sci |
Link | www.ncbi.nlm.nih.gov/pubmed/25918132 |
Study | Genome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma. |
Disease/Trait | Diisocyanate-induced asthma |
Initial sample | 74 European ancestry cases, 824 European ancestry controls |
Replication sample | NA |
Region | 1p13.2 |
Chromosome id | chr1 |
Chromosome position | 112068273 |
Reported gene | LOC643355, AF357532 |
Mapped gene | LOC105378906 - LOC105378907 |
Upstream gene id | 105378906 |
Downstream gene id | 105378907 |
SNP gene ids | |
Upstream gene distance | 60003 |
Downstream gene distance | 8795 |
SNP risk allele | rs12143327-A |
SNPs | rs12143327 |
Merged | 0 |
SNP id current | 12143327 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.081 |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | |
Or beta | 3.14 |
%95 Ci | [2.05-4.83] |
Platform | Illumina [1556551] |
CNV | N |
Mapped trait | response to diisocyanate, asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST002875 |