SNP Detail For rs12143327
1.Mapping Information
Human SNP ID rs12143327
Human chromosome chr1
Human SNP position 112068273
Pig chromosome chr4
Pig SNP position 118390346
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region1p13.2
Chromosome idchr1
Chromosome position112068273
Reported geneLOC643355, AF357532
Mapped geneLOC105378906 - LOC105378907
Upstream gene id105378906
Downstream gene id105378907
SNP gene ids
Upstream gene distance60003
Downstream gene distance8795
SNP risk allelers12143327-A
SNPsrs12143327
Merged0
SNP id current12143327
Contextintergenic_variant
Intergenic1
Allele frequency0.081
P value0.00000005
Pvalue mlog7.30102999566398
P value text
Or beta3.14
%95 Ci[2.05-4.83]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875