Human SNP ID | rs12136800 |
---|---|
Human chromosome | chr1 |
Human SNP position | 14278839 |
Pig chromosome | chr6 |
Pig SNP position | 67967780 |
PubMed ID | 26252872 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26252872 |
Study | Variations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level. |
Disease/Trait | Cerebral amyloid deposition in APOEe4 non-carriers (PET imaging) |
Initial sample | 370 European and other ancestry APOEe4 non-carriers |
Replication sample | NA |
Region | 1p36.21 |
Chromosome id | chr1 |
Chromosome position | 14278839 |
Reported gene | PRDM2, KAZN |
Mapped gene | KAZN, LOC105376764 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23254, 105376764 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12136800-T |
SNPs | rs12136800 |
Merged | |
SNP id current | 12136800 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.01 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 0.3532 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [~ 9000000] (imputed) |
CNV | N |
Mapped trait | cerebral amyloid deposition measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007707 |
Study accession | GCST003074 |