SNP Detail For rs12136800
1.Mapping Information
Human SNP ID rs12136800
Human chromosome chr1
Human SNP position 14278839
Pig chromosome chr6
Pig SNP position 67967780
2.Annotation Information
PubMed ID26252872
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26252872
StudyVariations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level.
Disease/TraitCerebral amyloid deposition in APOEe4 non-carriers (PET imaging)
Initial sample370 European and other ancestry APOEe4 non-carriers
Replication sampleNA
Region1p36.21
Chromosome idchr1
Chromosome position14278839
Reported genePRDM2, KAZN
Mapped geneKAZN, LOC105376764
Upstream gene id
Downstream gene id
SNP gene ids23254, 105376764
Upstream gene distance
Downstream gene distance
SNP risk allelers12136800-T
SNPsrs12136800
Merged
SNP id current12136800
Contextintron_variant
Intergenic0
Allele frequency0.01
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta0.3532
%95 Ci[NR] unit decrease
PlatformIllumina [~ 9000000] (imputed)
CNVN
Mapped traitcerebral amyloid deposition measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007707
Study accessionGCST003074