Human SNP ID | rs12129731 |
---|---|
Human chromosome | chr1 |
Human SNP position | 98222135 |
Pig chromosome | chr4 |
Pig SNP position | 131302067 |
PubMed ID | 26198764 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26198764 |
Study | Genome-wide association study of schizophrenia in Ashkenazi Jews. |
Disease/Trait | Schizophrenia |
Initial sample | 592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls |
Replication sample | NA |
Region | 1p21.3 |
Chromosome id | chr1 |
Chromosome position | 98222135 |
Reported gene | NR |
Mapped gene | LOC729987 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 729987 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12129731-T |
SNPs | rs12129731 |
Merged | |
SNP id current | 12129731 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.06 |
%95 Ci | [NR] |
Platform | Illumina [7158791] (imputed) |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST003048 |