SNP Detail For rs12129731
1.Mapping Information
Human SNP ID rs12129731
Human chromosome chr1
Human SNP position 98222135
Pig chromosome chr4
Pig SNP position 131302067
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region1p21.3
Chromosome idchr1
Chromosome position98222135
Reported geneNR
Mapped geneLOC729987
Upstream gene id
Downstream gene id
SNP gene ids729987
Upstream gene distance
Downstream gene distance
SNP risk allelers12129731-T
SNPsrs12129731
Merged
SNP id current12129731
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.06
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048