Human SNP ID | rs12120588 |
---|---|
Human chromosome | chr1 |
Human SNP position | 217741047 |
Pig chromosome | chr10 |
Pig SNP position | 9926599 |
PubMed ID | 25811787 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25811787 |
Study | Modulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans. |
Disease/Trait | Urate levels in overweight individuals |
Initial sample | up to 10,058 European ancestry male individuals, up to 7,189 European ancestry female individuals |
Replication sample | NA |
Region | 1q41 |
Chromosome id | chr1 |
Chromosome position | 217741047 |
Reported gene | SPATA17 |
Mapped gene | SPATA17 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 128153 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12120588-T |
SNPs | rs12120588 |
Merged | 0 |
SNP id current | 12120588 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.42 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (women) |
Or beta | 0.077 |
%95 Ci | [0.044-0.11] kg/m2 decrease |
Platform | Affymetrix, Illumina [at least 188473] (imputed) |
CNV | N |
Mapped trait | urate measurement, overweight body mass index status |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005935 |
Study accession | GCST002829 |