SNP Detail For rs12104221
1.Mapping Information
Human SNP ID rs12104221
Human chromosome chr19
Human SNP position 3797102
Pig chromosome chr2
Pig SNP position 75494573
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region19p13.3
Chromosome idchr19
Chromosome position3797102
Reported geneMATK
Mapped geneMATK
Upstream gene id
Downstream gene id
SNP gene ids4145
Upstream gene distance
Downstream gene distance
SNP risk allelers12104221-A
SNPsrs12104221
Merged0
SNP id current12104221
Contextintron_variant
Intergenic0
Allele frequency0.381
P value0.00000003
Pvalue mlog7.52287874528033
P value text(Total energy expenditure adj for weight )
Or beta0.05
%95 Ci[NR] kcal/d increase
PlatformIllumina [899892]
CNVN
Mapped traitenergy expenditure
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005109
Study accessionGCST001762