SNP Detail For rs12098946
1.Mapping Information
Human SNP ID rs12098946
Human chromosome chr11
Human SNP position 93359971
Pig chromosome chr9
Pig SNP position 29304135
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region11q21
Chromosome idchr11
Chromosome position93359971
Reported geneCCDC67
Mapped geneCCDC67, LOC102723746
Upstream gene id
Downstream gene id
SNP gene ids159989, 102723746
Upstream gene distance
Downstream gene distance
SNP risk allelers12098946-A
SNPsrs12098946
Merged0
SNP id current12098946
Contextintron_variant
Intergenic0
Allele frequency0.005
P value0.000004
Pvalue mlog5.39794000867203
P value text(Folate )
Or beta0.02
%95 Ci[NR] nmol/L increase
PlatformIllumina [899892]
CNVN
Mapped traitfolic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005111
Study accessionGCST001762