SNP Detail For rs12077769
1.Mapping Information
Human SNP ID rs12077769
Human chromosome chr1
Human SNP position 172379811
Pig chromosome chr9
Pig SNP position 126338133
2.Annotation Information
PubMed ID25378659
JournalJ Lipid Res
Linkwww.ncbi.nlm.nih.gov/pubmed/25378659
StudyGenetic Loci Associated with Circulating Levels of Very Long-Chain Saturated Fatty Acids.
Disease/TraitVery long-chain saturated fatty acid levels (fatty acid 22:0)
Initial sample10,129 European ancestry individuals
Replication sampleNA
Region1q24.3
Chromosome idchr1
Chromosome position172379811
Reported geneDNM3
Mapped geneDNM3, LOC102724541
Upstream gene id
Downstream gene id
SNP gene ids26052, 102724541
Upstream gene distance
Downstream gene distance
SNP risk allelers12077769-A
SNPsrs12077769
Merged0
SNP id current12077769
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta4.631
%95 Ci[NR] Z score increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitvery long-chain saturated fatty acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006796
Study accessionGCST002688