Human SNP ID | rs12053254 |
---|---|
Human chromosome | chr2 |
Human SNP position | 189742427 |
Pig chromosome | chr15 |
Pig SNP position | 105367744 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 2q32.2 |
Chromosome id | chr2 |
Chromosome position | 189742427 |
Reported gene | ANKAR, PMS1 |
Mapped gene | ANKAR |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 150709 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12053254-G |
SNPs | rs12053254 |
Merged | 0 |
SNP id current | 12053254 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.125 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Diet carbohydrate ) |
Or beta | 0.03 |
%95 Ci | [NR] g/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | energy intake |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003939 |
Study accession | GCST001762 |