Human SNP ID | rs1204798 |
---|---|
Human chromosome | chr6 |
Human SNP position | 116222684 |
Pig chromosome | chr1 |
Pig SNP position | 91972443 |
PubMed ID | 23064961 |
---|---|
Journal | J Dent Res |
Link | www.ncbi.nlm.nih.gov/pubmed/23064961 |
Study | GWAS of dental caries patterns in the permanent dentition. |
Disease/Trait | Dental caries |
Initial sample | 920 European ancestry individuals |
Replication sample | NA |
Region | 6q22.1 |
Chromosome id | chr6 |
Chromosome position | 116222684 |
Reported gene | NT5DC1 |
Mapped gene | NT5DC1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 221294 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1204798-? |
SNPs | rs1204798 |
Merged | 0 |
SNP id current | 1204798 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (DMFS2) |
Or beta | |
%95 Ci | |
Platform | Illumina [518997] |
CNV | N |
Mapped trait | dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003819 |
Study accession | GCST001713 |