SNP Detail For rs12044963
1.Mapping Information
Human SNP ID rs12044963
Human chromosome chr1
Human SNP position 111849738
Pig chromosome chr4
Pig SNP position 118685025
2.Annotation Information
PubMed ID22610502
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22610502
StudyGenome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
Disease/TraitImmune reponse to smallpox (secreted IFN-alpha)
Initial sampleUp to 512 European ancestry individuals, up to 199 African American individuals
Replication sampleNA
Region1p13.2
Chromosome idchr1
Chromosome position111849738
Reported geneKCND3
Mapped geneKCND3
Upstream gene id
Downstream gene id
SNP gene ids3752
Upstream gene distance
Downstream gene distance
SNP risk allelers12044963-A
SNPsrs12044963
Merged0
SNP id current12044963
Contextintron_variant
Intergenic0
Allele frequency
P value0.0000000009
Pvalue mlog9.04575749056067
P value text(AA)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine, cytokine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873
Study accessionGCST001538