SNP Detail For rs12044355
1.Mapping Information
Human SNP ID rs12044355
Human chromosome chr1
Human SNP position 231708601
Pig chromosome chr14
Pig SNP position 63426247
2.Annotation Information
PubMed ID19118814
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19118814
StudyGenome-wide association study implicates a chromosome 12 risk locus for late-onset Alzheimer disease.
Disease/TraitAlzheimer__s disease
Initial sample492 European ancestry cases, 496 European ancestry controls
Replication sample238 European ancestry cases, 220 European ancestry controls
Region1q42.2
Chromosome idchr1
Chromosome position231708601
Reported geneDISC1
Mapped geneDISC1, TSNAX-DISC1
Upstream gene id
Downstream gene id
SNP gene ids27185, 100303453
Upstream gene distance
Downstream gene distance
SNP risk allelers12044355-?
SNPsrs12044355
Merged0
SNP id current12044355
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta
%95 Ci
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST000310