SNP Detail For rs12044149
1.Mapping Information
Human SNP ID rs12044149
Human chromosome chr1
Human SNP position 67135003
Pig chromosome chr6
Pig SNP position 134322293
2.Annotation Information
PubMed ID26626624
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26626624
StudyGenome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture.
Disease/TraitPsoriatic arthritis
Initial sample1,946 European ancestry cases, 4,934 European ancestry controls
Replication sampleup to 2,883 European ancestry cases, up to 14,179 European ancestry controls
Region1p31.3
Chromosome idchr1
Chromosome position67135003
Reported geneIL23R, C1orf141
Mapped geneC1orf141
Upstream gene id
Downstream gene id
SNP gene ids400757
Upstream gene distance
Downstream gene distance
SNP risk allelers12044149-T
SNPsrs12044149
Merged0
SNP id current12044149
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000000000003
Pvalue mlog11.5228787452803
P value text
Or beta1.296
%95 CiNR
PlatformIllumina [11532644] (imputed)
CNVN
Mapped traitpsoriatic arthritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003778
Study accessionGCST003270