Human SNP ID | rs12044149 |
---|---|
Human chromosome | chr1 |
Human SNP position | 67135003 |
Pig chromosome | chr6 |
Pig SNP position | 134322293 |
PubMed ID | 26626624 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26626624 |
Study | Genome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture. |
Disease/Trait | Psoriatic arthritis |
Initial sample | 1,946 European ancestry cases, 4,934 European ancestry controls |
Replication sample | up to 2,883 European ancestry cases, up to 14,179 European ancestry controls |
Region | 1p31.3 |
Chromosome id | chr1 |
Chromosome position | 67135003 |
Reported gene | IL23R, C1orf141 |
Mapped gene | C1orf141 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 400757 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12044149-T |
SNPs | rs12044149 |
Merged | 0 |
SNP id current | 12044149 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000000003 |
Pvalue mlog | 11.5228787452803 |
P value text | |
Or beta | 1.296 |
%95 Ci | NR |
Platform | Illumina [11532644] (imputed) |
CNV | N |
Mapped trait | psoriatic arthritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003778 |
Study accession | GCST003270 |