SNP Detail For rs12042938
1.Mapping Information
Human SNP ID rs12042938
Human chromosome chr1
Human SNP position 231681096
Pig chromosome chr14
Pig SNP position 63450622
2.Annotation Information
PubMed ID21483430
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21483430
StudyImpact of DISC1 variation on neuroanatomical and neurocognitive phenotypes.
Disease/TraitNeuranatomic and neurocognitive phenotypes
Initial sample857 Mexican American individuals
Replication sampleNA
Region1q42.2
Chromosome idchr1
Chromosome position231681096
Reported geneDISC1
Mapped geneDISC1, TSNAX-DISC1
Upstream gene id
Downstream gene id
SNP gene ids27185, 100303453
Upstream gene distance
Downstream gene distance
SNP risk allelers12042938-C
SNPsrs12042938
Merged0
SNP id current12042938
Contextintron_variant
Intergenic0
Allele frequency0.48
P value4E-36
Pvalue mlog35.397940008672
P value text
Or beta
%95 Ci
PlatformIllumina [543031]
CNVN
Mapped traitneuroimaging measurement, South Texas Assessment of Neurocognition
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004346, http://www.ebi.ac.uk/efo/EFO_0004785
Study accessionGCST001037