SNP Detail For rs12034598
1.Mapping Information
Human SNP ID rs12034598
Human chromosome chr1
Human SNP position 207584170
Pig chromosome chr9
Pig SNP position 74550462
2.Annotation Information
PubMed ID22291609
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22291609
StudyA genome-wide association scan on the levels of markers of inflammation in Sardinians reveals associations that underpin its complex regulation.
Disease/TraitInflammatory biomarkers
Initial sample4,694 Sardinian individuals
Replication sample1,392 Sardinian individuals
Region1q32.2
Chromosome idchr1
Chromosome position207584170
Reported geneCR1
Mapped geneCR1
Upstream gene id
Downstream gene id
SNP gene ids1378
Upstream gene distance
Downstream gene distance
SNP risk allelers12034598-A
SNPsrs12034598
Merged0
SNP id current12034598
Contextintron_variant
Intergenic0
Allele frequency0.408
P value0.00000000000009
Pvalue mlog13.0457574905606
P value text(ESR)
Or beta
%95 Ci
PlatformAffymetrix [~ 1900000] (imputed)
CNVN
Mapped traitblood sedimentation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004304
Study accessionGCST001385