SNP Detail For rs12032643
1.Mapping Information
Human SNP ID rs12032643
Human chromosome chr1
Human SNP position 248874237
Pig chromosome chr2
Pig SNP position 55171295
2.Annotation Information
PubMed ID23049088
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23049088
StudyA genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.
Disease/TraitMyopia (pathological)
Initial sample187 European ancestry cases, 1064 European ancestry controls
Replication sample
Region1q44
Chromosome idchr1
Chromosome position248874237
Reported geneintergenic
Mapped genePGBD2
Upstream gene id
Downstream gene id
SNP gene ids267002
Upstream gene distance
Downstream gene distance
SNP risk allelers12032643-?
SNPsrs12032643
Merged0
SNP id current12032643
Contextregulatory_region_variant
Intergenic0
Allele frequency0.896
P value0.000000001
Pvalue mlog9
P value text
Or beta
%95 Ci[NR]
PlatformAffymetrix, Illumina [152234]
CNVN
Mapped traitpathological myopia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004207
Study accessionGCST001712