SNP Detail For rs12018439
1.Mapping Information
Human SNP ID rs12018439
Human chromosome chr13
Human SNP position 84816938
Pig chromosome chr11
Pig SNP position 60943777
2.Annotation Information
PubMed ID26545240
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26545240
StudyGenetic Determinants of Pelvic Organ Prolapse among African American and Hispanic Women in the Women__s Health Initiative.
Disease/TraitPelvic organ prolapse
Initial sample793 African American cases, 948 African American controls, 606 Hispanic cases, 305 Hispanic controls
Replication sampleNA
Region13q31.1
Chromosome idchr13
Chromosome position84816938
Reported geneLINC00333
Mapped geneSNORA107 - LOC105370290
Upstream gene id106635542
Downstream gene id105370290
SNP gene ids
Upstream gene distance33160
Downstream gene distance54776
SNP risk allelers12018439-G
SNPsrs12018439
Merged0
SNP id current12018439
Contextintergenic_variant
Intergenic1
Allele frequency0.63
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.3333333
%95 Ci
PlatformAffymetrix [at least 730985] (imputed)
CNVN
Mapped traitpelvic organ prolapse
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004710
Study accessionGCST003226