SNP Detail For rs12006166
1.Mapping Information
Human SNP ID rs12006166
Human chromosome chr9
Human SNP position 115662708
Pig chromosome chr1
Pig SNP position 287371638
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine
Initial sample23,285 European ancestry cases, 95,425 European ancestry controls
Replication sampleNA
Region9q33.1
Chromosome idchr9
Chromosome position115662708
Reported geneintergenic
Mapped geneLOC105376235
Upstream gene id
Downstream gene id
SNP gene ids105376235
Upstream gene distance
Downstream gene distance
SNP risk allelers12006166-T
SNPsrs12006166
Merged0
SNP id current12006166
Contextintergenic_variant
Intergenic0
Allele frequency0.16
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta1.08
%95 Ci[1.05-1.12]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002081