SNP Detail For rs12003180
1.Mapping Information
Human SNP ID rs12003180
Human chromosome chr9
Human SNP position 15283099
Pig chromosome chr1
Pig SNP position 231153963
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region9p22.3
Chromosome idchr9
Chromosome position15283099
Reported geneNR
Mapped geneTTC39B
Upstream gene id
Downstream gene id
SNP gene ids158219
Upstream gene distance
Downstream gene distance
SNP risk allelers12003180-?
SNPsrs12003180
Merged0
SNP id current12003180
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.6032
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821