Human SNP ID | rs11987678 |
---|---|
Human chromosome | chr8 |
Human SNP position | 80316591 |
Pig chromosome | chr4 |
Pig SNP position | 61511891 |
PubMed ID | 23728906 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23728906 |
Study | A genome-wide association study of sleep habits and insomnia. |
Disease/Trait | Sleep duration |
Initial sample | 2,278 European ancestry individuals |
Replication sample | NA |
Region | 8q21.13 |
Chromosome id | chr8 |
Chromosome position | 80316591 |
Reported gene | RP11-941H19.3 |
Mapped gene | RPS5P5 - LOC100216346 |
Upstream gene id | 340443 |
Downstream gene id | 100216346 |
SNP gene ids | |
Upstream gene distance | 15055 |
Downstream gene distance | 34525 |
SNP risk allele | rs11987678-C |
SNPs | rs11987678 |
Merged | 0 |
SNP id current | 11987678 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.32 |
%95 Ci | [0.18-0.46] unit decrease |
Platform | Illumina [2380486] (imputed) |
CNV | N |
Mapped trait | sleep duration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005271 |
Study accession | GCST002053 |