SNP Detail For rs11985951
1.Mapping Information
Human SNP ID rs11985951
Human chromosome chr8
Human SNP position 20734998
Pig chromosome chr14
Pig SNP position 5201682
2.Annotation Information
PubMed ID24700089
JournalJ Med Virol
Linkwww.ncbi.nlm.nih.gov/pubmed/24700089
StudyGenome-wide association study of HPV-associated cervical cancer in Japanese women.
Disease/TraitCervical cancer
Initial sample226 Japanese ancestry cases, 186 Japanese ancestry controls
Replication sampleNA
Region8p21.3
Chromosome idchr8
Chromosome position20734998
Reported geneintergenic
Mapped geneLOC105379398 - LOC105379315
Upstream gene id105379398
Downstream gene id105379315
SNP gene ids
Upstream gene distance321709
Downstream gene distance180987
SNP risk allelers11985951-T
SNPsrs11985951
Merged0
SNP id current11985951
Contextintergenic_variant
Intergenic1
Allele frequency0.871
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta3.36
%95 Ci[1.94-5.83]
PlatformAffymetrix [556045]
CNVN
Mapped traitcervical carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001061
Study accessionGCST002405