Human SNP ID | rs11970772 |
---|---|
Human chromosome | chr6 |
Human SNP position | 41957552 |
Pig chromosome | chr7 |
Pig SNP position | 42507351 |
PubMed ID | 19820697 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19820697 |
Study | A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium. |
Disease/Trait | Hematological parameters |
Initial sample | 4,627 European ancestry individuals |
Replication sample | 9,316 European ancestry individuals |
Region | 6p21.1 |
Chromosome id | chr6 |
Chromosome position | 41957552 |
Reported gene | BYSL, CCND3 |
Mapped gene | CCND3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 896 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11970772-T |
SNPs | rs11970772 |
Merged | 0 |
SNP id current | 11970772 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 7E-19 |
Pvalue mlog | 18.1549019599857 |
P value text | (MCV) |
Or beta | 0.58 |
%95 Ci | [0.44-0.70] fl increase |
Platform | Affymetrix, Illumina [~ 2110000] (imputed) |
CNV | N |
Mapped trait | mean corpuscular volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004526 |
Study accession | GCST000498 |