Human SNP ID | rs11954519 |
---|---|
Human chromosome | chr5 |
Human SNP position | 39902263 |
Pig chromosome | chr16 |
Pig SNP position | 26346290 |
PubMed ID | 23263486 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23263486 |
Study | Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. |
Disease/Trait | Urate levels |
Initial sample | 49,825 European ancestry males, 60,522 European ancestry females |
Replication sample | Up to 32,813 European ancestry individuals |
Region | 5p13.1 |
Chromosome id | chr5 |
Chromosome position | 39902263 |
Reported gene | DAB2 |
Mapped gene | LOC101926940 - LINC00603 |
Upstream gene id | 101926940 |
Downstream gene id | 102467077 |
SNP gene ids | |
Upstream gene distance | 377555 |
Downstream gene distance | 150028 |
SNP risk allele | rs11954519-A |
SNPs | rs11954519 |
Merged | 0 |
SNP id current | 11954519 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.73 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (women) |
Or beta | 0.033 |
%95 Ci | [0.019-0.047] mg/dl decrease |
Platform | Affymetrix, Illumina, Perlegen [2450547] (imputed) |
CNV | N |
Mapped trait | urate measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531 |
Study accession | GCST001791 |