SNP Detail For rs11954519
1.Mapping Information
Human SNP ID rs11954519
Human chromosome chr5
Human SNP position 39902263
Pig chromosome chr16
Pig SNP position 26346290
2.Annotation Information
PubMed ID23263486
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23263486
StudyGenome-wide association analyses identify 18 new loci associated with serum urate concentrations.
Disease/TraitUrate levels
Initial sample49,825 European ancestry males, 60,522 European ancestry females
Replication sampleUp to 32,813 European ancestry individuals
Region5p13.1
Chromosome idchr5
Chromosome position39902263
Reported geneDAB2
Mapped geneLOC101926940 - LINC00603
Upstream gene id101926940
Downstream gene id102467077
SNP gene ids
Upstream gene distance377555
Downstream gene distance150028
SNP risk allelers11954519-A
SNPsrs11954519
Merged0
SNP id current11954519
Contextintron_variant
Intergenic1
Allele frequency0.73
P value0.000004
Pvalue mlog5.39794000867203
P value text(women)
Or beta0.033
%95 Ci[0.019-0.047] mg/dl decrease
PlatformAffymetrix, Illumina, Perlegen [2450547] (imputed)
CNVN
Mapped traiturate measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531
Study accessionGCST001791