Human SNP ID | rs11924390 |
---|---|
Human chromosome | chr3 |
Human SNP position | 186715310 |
Pig chromosome | chr13 |
Pig SNP position | 133904270 |
PubMed ID | 20876611 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20876611 |
Study | Genome-wide association study for adiponectin levels in Filipino women identifies CDH13 and a novel uncommon haplotype at KNG1-ADIPOQ. |
Disease/Trait | Adiponectin levels |
Initial sample | 1,776 Filipino ancestry female individuals |
Replication sample | 1,774 Filipino ancestry offspring |
Region | 3q27.3 |
Chromosome id | chr3 |
Chromosome position | 186715310 |
Reported gene | KNG1 |
Mapped gene | LOC105374258 - KNG1 |
Upstream gene id | 105374258 |
Downstream gene id | 3827 |
SNP gene ids | |
Upstream gene distance | 282 |
Downstream gene distance | 1999 |
SNP risk allele | rs11924390-C |
SNPs | rs11924390 |
Merged | 0 |
SNP id current | 11924390 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.5 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 0.06 |
%95 Ci | [0.04-0.08] unit decrease |
Platform | Affymetrix [2073674] (imputed) |
CNV | N |
Mapped trait | adiponectin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004502 |
Study accession | GCST000812 |