SNP Detail For rs11924390
1.Mapping Information
Human SNP ID rs11924390
Human chromosome chr3
Human SNP position 186715310
Pig chromosome chr13
Pig SNP position 133904270
2.Annotation Information
PubMed ID20876611
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20876611
StudyGenome-wide association study for adiponectin levels in Filipino women identifies CDH13 and a novel uncommon haplotype at KNG1-ADIPOQ.
Disease/TraitAdiponectin levels
Initial sample1,776 Filipino ancestry female individuals
Replication sample1,774 Filipino ancestry offspring
Region3q27.3
Chromosome idchr3
Chromosome position186715310
Reported geneKNG1
Mapped geneLOC105374258 - KNG1
Upstream gene id105374258
Downstream gene id3827
SNP gene ids
Upstream gene distance282
Downstream gene distance1999
SNP risk allelers11924390-C
SNPsrs11924390
Merged0
SNP id current11924390
Contextintron_variant
Intergenic1
Allele frequency0.5
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta0.06
%95 Ci[0.04-0.08] unit decrease
PlatformAffymetrix [2073674] (imputed)
CNVN
Mapped traitadiponectin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004502
Study accessionGCST000812