SNP Detail For rs11923600
1.Mapping Information
Human SNP ID rs11923600
Human chromosome chr3
Human SNP position 176209663
Pig chromosome chr13
Pig SNP position 123314338
2.Annotation Information
PubMed ID23456168
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23456168
StudyGenome-wide association study in Han Chinese identifies three novel loci for human height.
Disease/TraitHeight
Initial sample6,534 Han Chinese ancestry individuals
Replication sample1,881 Han Chinese ancestry individuals from 637 families
Region3q26.32
Chromosome idchr3
Chromosome position176209663
Reported geneNAALADL2
Mapped geneACTG1P23 - LOC105374228
Upstream gene id442097
Downstream gene id105374228
SNP gene ids
Upstream gene distance231088
Downstream gene distance153058
SNP risk allelers11923600-G
SNPsrs11923600
Merged0
SNP id current11923600
Contextintergenic_variant
Intergenic1
Allele frequency0.71
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.084
%95 Ci[0.047-0.121] unit increase
PlatformAffymetrix [1532051] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001885