Human SNP ID | rs11915082 |
---|---|
Human chromosome | chr3 |
Human SNP position | 196082268 |
Pig chromosome | chr13 |
Pig SNP position | 143408289 |
PubMed ID | 19862010 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19862010 |
Study | Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium. |
Disease/Trait | Mean corpuscular hemoglobin |
Initial sample | 24,167 European ancestry individuals |
Replication sample | 9,456 European ancestry individuals |
Region | 3q29 |
Chromosome id | chr3 |
Chromosome position | 196082268 |
Reported gene | TFRC |
Mapped gene | TFRC - LINC00885 |
Upstream gene id | 7037 |
Downstream gene id | 401109 |
SNP gene ids | |
Upstream gene distance | 107 |
Downstream gene distance | 60368 |
SNP risk allele | rs11915082-A |
SNPs | rs11915082 |
Merged | 0 |
SNP id current | 11915082 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000000000008 |
Pvalue mlog | 12.096910013008 |
P value text | |
Or beta | 0 |
%95 Ci | [0.003-0.005] pg increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | mean corpuscular hemoglobin |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004527 |
Study accession | GCST000504 |