SNP Detail For rs11888485
1.Mapping Information
Human SNP ID rs11888485
Human chromosome chr2
Human SNP position 117929656
Pig chromosome chr15
Pig SNP position 26880829
2.Annotation Information
PubMed ID21775986
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/21775986
StudyThe landscape of recombination in African Americans.
Disease/TraitRecombination measurement
Initial sample30,033 African American individuals
Replication sampleNA
Region2q14.1
Chromosome idchr2
Chromosome position117929656
Reported geneCCDC93
Mapped geneCCDC93, LOC101929908
Upstream gene id
Downstream gene id
SNP gene ids54520, 101929908
Upstream gene distance
Downstream gene distance
SNP risk allelers11888485-?
SNPsrs11888485
Merged0
SNP id current11888485
Contextintron_variant
Intergenic0
Allele frequency0.92
P value0.00000003
Pvalue mlog7.52287874528033
P value text(African-enrichment)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [3058149] (imputed)
CNVN
Mapped traitrecombination measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005919
Study accessionGCST001168