SNP Detail For rs11880706
1.Mapping Information
Human SNP ID rs11880706
Human chromosome chr19
Human SNP position 6080471
Pig chromosome chr2
Pig SNP position 73539301
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region19p13.3
Chromosome idchr19
Chromosome position6080471
Reported geneNR
Mapped geneRFX2
Upstream gene id
Downstream gene id
SNP gene ids5990
Upstream gene distance
Downstream gene distance
SNP risk allelers11880706-?
SNPsrs11880706
Merged0
SNP id current11880706
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.4393
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821