SNP Detail For rs11865038
1.Mapping Information
Human SNP ID rs11865038
Human chromosome chr16
Human SNP position 31083850
Pig chromosome chr3
Pig SNP position 17726952
2.Annotation Information
PubMed ID22451204
JournalAnn Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/22451204
StudyMeta-analysis of Parkinson__s disease: identification of a novel locus, RIT2.
Disease/TraitParkinson__s disease
Initial sample4,238 European ancestry cases, 4,239 European ancestry controls
Replication sample3,738 European ancestry cases, 2,111 European ancestry controls
Region16p11.2
Chromosome idchr16
Chromosome position31083850
Reported genePOL3S
Mapped genePRSS53
Upstream gene id
Downstream gene id
SNP gene ids339105
Upstream gene distance
Downstream gene distance
SNP risk allelers11865038-?
SNPsrs11865038
Merged0
SNP id current11865038
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta1.14
%95 Ci[NR]
PlatformIllumina [2500000] (imputed)
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST001430