SNP Detail For rs11861787
1.Mapping Information
Human SNP ID rs11861787
Human chromosome chr16
Human SNP position 8467743
Pig chromosome chr3
Pig SNP position 35097137
2.Annotation Information
PubMed ID23962720
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23962720
StudyA genome-wide association study and biological pathway analysis of epilepsy prognosis in a prospective cohort of newly treated epilepsy.
Disease/TraitEpilepsy (remission after treatment)
Initial sample889 European and unknown ancestry epilepsy cases
Replication sampleNA
Region16p13.2
Chromosome idchr16
Chromosome position8467743
Reported geneNR
Mapped geneLOC105371072 - LOC100131080
Upstream gene id105371072
Downstream gene id100131080
SNP gene ids
Upstream gene distance63592
Downstream gene distance40309
SNP risk allelers11861787-C
SNPsrs11861787
Merged0
SNP id current11861787
Contextintergenic_variant
Intergenic1
Allele frequency0.25
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.8868
%95 Ci[NR]
PlatformIllumina [6923995] (imputed)
CNVN
Mapped traitresponse to drug, epilepsy
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493, http://www.ebi.ac.uk/efo/EFO_0000474
Study accessionGCST002141