Human SNP ID | rs11861787 |
---|---|
Human chromosome | chr16 |
Human SNP position | 8467743 |
Pig chromosome | chr3 |
Pig SNP position | 35097137 |
PubMed ID | 23962720 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23962720 |
Study | A genome-wide association study and biological pathway analysis of epilepsy prognosis in a prospective cohort of newly treated epilepsy. |
Disease/Trait | Epilepsy (remission after treatment) |
Initial sample | 889 European and unknown ancestry epilepsy cases |
Replication sample | NA |
Region | 16p13.2 |
Chromosome id | chr16 |
Chromosome position | 8467743 |
Reported gene | NR |
Mapped gene | LOC105371072 - LOC100131080 |
Upstream gene id | 105371072 |
Downstream gene id | 100131080 |
SNP gene ids | |
Upstream gene distance | 63592 |
Downstream gene distance | 40309 |
SNP risk allele | rs11861787-C |
SNPs | rs11861787 |
Merged | 0 |
SNP id current | 11861787 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.25 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.8868 |
%95 Ci | [NR] |
Platform | Illumina [6923995] (imputed) |
CNV | N |
Mapped trait | response to drug, epilepsy |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0042493, http://www.ebi.ac.uk/efo/EFO_0000474 |
Study accession | GCST002141 |