Human SNP ID | rs11841001 |
---|---|
Human chromosome | chr13 |
Human SNP position | 75674967 |
Pig chromosome | chr11 |
Pig SNP position | 52548265 |
PubMed ID | 23761726 |
---|---|
Journal | Mol Vis |
Link | www.ncbi.nlm.nih.gov/pubmed/23761726 |
Study | Interrogation of the platelet-derived growth factor receptor alpha locus and corneal astigmatism in Australians of Northern European ancestry: results of a genome-wide association study. |
Disease/Trait | Corneal astigmatism |
Initial sample | 2,784 European ancestry individuals |
Replication sample | |
Region | 13q22.2 |
Chromosome id | chr13 |
Chromosome position | 75674967 |
Reported gene | NR |
Mapped gene | LMO7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4008 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11841001-A |
SNPs | rs11841001 |
Merged | 0 |
SNP id current | 11841001 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.208 |
%95 Ci | [0.12-0.30] unit increase |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | Astigmatism |
Mapped trait URI | http://purl.obolibrary.org/obo/HP_0000483 |
Study accession | GCST002064 |