SNP Detail For rs11841001
1.Mapping Information
Human SNP ID rs11841001
Human chromosome chr13
Human SNP position 75674967
Pig chromosome chr11
Pig SNP position 52548265
2.Annotation Information
PubMed ID23761726
JournalMol Vis
Linkwww.ncbi.nlm.nih.gov/pubmed/23761726
StudyInterrogation of the platelet-derived growth factor receptor alpha locus and corneal astigmatism in Australians of Northern European ancestry: results of a genome-wide association study.
Disease/TraitCorneal astigmatism
Initial sample2,784 European ancestry individuals
Replication sample
Region13q22.2
Chromosome idchr13
Chromosome position75674967
Reported geneNR
Mapped geneLMO7
Upstream gene id
Downstream gene id
SNP gene ids4008
Upstream gene distance
Downstream gene distance
SNP risk allelers11841001-A
SNPsrs11841001
Merged0
SNP id current11841001
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.208
%95 Ci[0.12-0.30] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitAstigmatism
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0000483
Study accessionGCST002064