SNP Detail For rs118162387
1.Mapping Information
Human SNP ID rs118162387
Human chromosome chr11
Human SNP position 113949306
Pig chromosome chr9
Pig SNP position 46371292
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region11q23.2
Chromosome idchr11
Chromosome position113949306
Reported geneNR
Mapped geneHTR3B - HTR3A
Upstream gene id9177
Downstream gene id3359
SNP gene ids
Upstream gene distance2745
Downstream gene distance25769
SNP risk allelers118162387-G
SNPsrs118162387
Merged
SNP id current118162387
Contextdownstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.1627907
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048