Human SNP ID | rs11805526 |
---|---|
Human chromosome | chr1 |
Human SNP position | 239471949 |
Pig chromosome | chr14 |
Pig SNP position | 55921770 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Neuritic plaque |
Initial sample | up to 4,232 individuals |
Replication sample | NA |
Region | 1q43 |
Chromosome id | chr1 |
Chromosome position | 239471949 |
Reported gene | intergenic |
Mapped gene | CHRM3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1131 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11805526-T |
SNPs | rs11805526 |
Merged | 0 |
SNP id current | 11805526 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0213 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (Ordinal) |
Or beta | 1.3355 |
%95 Ci | [0.75-1.92] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | neuritic plaque measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006798 |
Study accession | GCST002592 |